PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009591317.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 257aa    MW: 29860.7 Da    PI: 7.0759
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009591317.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.65e-23121403128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     +G+rFhPt+ el+ ++Lk+ ++g++l+ e   ++ +diy    Pw++  ++ + eek  yfF++ +k++ + +r +r+ ++g+Wk +    ++++
  XP_009591317.1  12 MGVRFHPTEAELI-NFLKRFLKGESLPSECPnFQLADIYGDqPPWEIFgASGHPEEKVRYFFTRLKKQKIEHTRVRRTCANGTWKGQTGIDPIKN 105
                     7************.9**********88755559999***87368***733333456677**************************888889**** PP

             NAM  95 kkgelvglkktLvfykgrapkge.ktdWvmheyrl 128
                      kg++vg ++ + f + r+++ge +  W+m+ey++
  XP_009591317.1 106 GKGTVVGFRRCFKFQTSRSKEGEyNKIWLMKEYSV 140
                     9**************999999984567******86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-2610162IPR003441NAC domain
PROSITE profilePS5100527.60910163IPR003441NAC domain
PfamPF023654.4E-1512140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MSTVPAARRR VMGVRFHPTE AELINFLKRF LKGESLPSEC PNFQLADIYG DQPPWEIFGA  60
SGHPEEKVRY FFTRLKKQKI EHTRVRRTCA NGTWKGQTGI DPIKNGKGTV VGFRRCFKFQ  120
TSRSKEGEYN KIWLMKEYSV GDDFLRENNI PKEDFVVCRI KKNIRSKKNH GVNMEEQDVP  180
KVIETMLHET DEDYCTTVQP ATICQATDQH QVMDETQKMN EQNNNSSNIN DCSNYQEEIN  240
WANDLLIGIE NFGDIIW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532600.0EU753260.1 Nicotiana tabacum NAC transcription factor (NAC3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009591317.10.0PREDICTED: NAC domain-containing protein 78-like
TrEMBLB3VK721e-154B3VK72_TOBAC; NAC transcription factor
STRINGPGSC0003DMT4000899077e-65(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.18e-17NAC domain containing protein 2